[INFO] fetching crate flann 0.1.0...
[INFO] building flann-0.1.0 against master#881c1ac408d93bb7adaa3a51dabab9266e82eee8 for issue-85264
[INFO] extracting crate flann 0.1.0 into /workspace/builds/worker-4/source
[INFO] validating manifest of crates.io crate flann 0.1.0 on toolchain 881c1ac408d93bb7adaa3a51dabab9266e82eee8
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate flann 0.1.0
[INFO] finished tweaking crates.io crate flann 0.1.0
[INFO] tweaked toml for crates.io crate flann 0.1.0 written to /workspace/builds/worker-4/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded flann-sys v0.1.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a958d307647fe427f29967df3d99928b2919cf36169dbc56ab4a0c20589c6004
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "a958d307647fe427f29967df3d99928b2919cf36169dbc56ab4a0c20589c6004", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a958d307647fe427f29967df3d99928b2919cf36169dbc56ab4a0c20589c6004", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a958d307647fe427f29967df3d99928b2919cf36169dbc56ab4a0c20589c6004", kill_on_drop: false }`
[INFO] [stdout] a958d307647fe427f29967df3d99928b2919cf36169dbc56ab4a0c20589c6004
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+881c1ac408d93bb7adaa3a51dabab9266e82eee8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b77f82fd660527f529df3b5d1d9f27a7c6a3b8f51b8a955a22b6aa5d2c535c12
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b77f82fd660527f529df3b5d1d9f27a7c6a3b8f51b8a955a22b6aa5d2c535c12", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.95
[INFO] [stderr]    Compiling memchr v2.4.0
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling glob v0.2.11
[INFO] [stderr]    Compiling proc-macro2 v1.0.27
[INFO] [stderr]    Compiling libloading v0.4.3
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling bindgen v0.32.3
[INFO] [stderr]    Compiling syn v1.0.72
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling gimli v0.24.0
[INFO] [stderr]    Compiling object v0.24.0
[INFO] [stderr]    Compiling rustc-demangle v0.1.19
[INFO] [stderr]    Compiling either v1.6.1
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling proc-macro2 v0.2.3
[INFO] [stderr]    Compiling backtrace v0.3.59
[INFO] [stderr]    Compiling cmake v0.1.45
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling quote v0.4.2
[INFO] [stderr]    Compiling generic-array v0.12.4
[INFO] [stderr]    Compiling log v0.3.9
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling clang-sys v0.21.2
[INFO] [stderr]    Compiling aho-corasick v0.6.10
[INFO] [stderr]    Compiling memchr v1.0.2
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling which v1.0.5
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling nom v3.2.1
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling cexpr v0.2.3
[INFO] [stderr]    Compiling env_logger v0.4.3
[INFO] [stderr]    Compiling addr2line v0.15.1
[INFO] [stderr]    Compiling synstructure v0.12.4
[INFO] [stderr]    Compiling failure v0.1.8
[INFO] [stderr]    Compiling flann-sys v0.1.0
[INFO] [stderr] error: failed to run custom build command for `flann-sys v0.1.0`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/flann-sys-c19ffe37cfd8130f/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:rustc-link-lib=gomp
[INFO] [stderr]   cargo:rustc-link-lib=stdc++
[INFO] [stderr]   running: "cmake" "/opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/flann" "-DBUILD_EXAMPLES=OFF" "-DBUILD_TESTS=OFF" "-DBUILD_DOC=OFF" "-DBUILD_PYTHON_BINDINGS=OFF" "-DBUILD_MATLAB_BINDINGS=OFF" "-DUSE_OPENMP=ON" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/flann-sys-aa8c71066b047db3/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug"
[INFO] [stderr]   -- The C compiler identification is GNU 9.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 9.3.0
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc -- works
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ -- works
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python (found version "2.7.18") 
[INFO] [stderr]   -- Could NOT find HDF5 (missing: HDF5_LIBRARIES HDF5_INCLUDE_DIRS) (found version "")
[INFO] [stderr]   -- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY) 
[INFO] [stderr]   -- Found OpenMP_C: -fopenmp (found version "4.5") 
[INFO] [stderr]   -- Found OpenMP_CXX: -fopenmp (found version "4.5") 
[INFO] [stderr]   -- Found OpenMP: TRUE (found version "4.5")  
[INFO] [stderr]   -- Install prefix: /opt/rustwide/target/debug/build/flann-sys-aa8c71066b047db3/out
[INFO] [stderr]   -- Build type: Debug
[INFO] [stderr]   -- Building C bindings: ON
[INFO] [stderr]   -- Building examples: OFF
[INFO] [stderr]   -- Building tests: OFF
[INFO] [stderr]   -- Building documentation: OFF
[INFO] [stderr]   -- Building python bindings: OFF
[INFO] [stderr]   -- Building matlab bindings: OFF
[INFO] [stderr]   -- Building CUDA library: OFF
[INFO] [stderr]   -- Using OpenMP support: ON
[INFO] [stderr]   -- Using MPI support: OFF
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/flann-sys-aa8c71066b047db3/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   CMake Warning at CMakeLists.txt:78 (message):
[INFO] [stderr]     hdf5 library not found, some tests will not be run
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Warning at CMakeLists.txt:117 (message):
[INFO] [stderr]     gtest library not found, some tests will not be run
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error: Could not open file for write in copy operation /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/flann/src/cpp/flann/config.h.tmp
[INFO] [stderr]   CMake Error: : System Error: Read-only file system
[INFO] [stderr]   CMake Error at src/cpp/CMakeLists.txt:5 (configure_file):
[INFO] [stderr]     configure_file Problem configuring file
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at '
[INFO] [stderr]   command did not execute successfully, got: exit status: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.45/src/lib.rs:894:5
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55e9517130c0 - std::backtrace_rs::backtrace::libunwind::trace::hdcf4f90f85129e83
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5
[INFO] [stderr]      1:     0x55e9517130c0 - std::backtrace_rs::backtrace::trace_unsynchronized::h2669e30cb82f6732
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stderr]      2:     0x55e9517130c0 - std::sys_common::backtrace::_print_fmt::hfbda19e17f6db318
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:67:5
[INFO] [stderr]      3:     0x55e9517130c0 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h1a8751bf59281272
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:46:22
[INFO] [stderr]      4:     0x55e95173930f - core::fmt::write::h7aa6cd0067dca82a
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/core/src/fmt/mod.rs:1094:17
[INFO] [stderr]      5:     0x55e95170fa35 - std::io::Write::write_fmt::hd7dd3a1df9b6befb
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/io/mod.rs:1584:15
[INFO] [stderr]      6:     0x55e95171582b - std::sys_common::backtrace::_print::h551e9ec8a9fa8106
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:49:5
[INFO] [stderr]      7:     0x55e95171582b - std::sys_common::backtrace::print::ha4b1c5e95fa040b3
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:36:9
[INFO] [stderr]      8:     0x55e95171582b - std::panicking::default_hook::{{closure}}::h0b34c9ab7fb9f857
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:208:50
[INFO] [stderr]      9:     0x55e95171530d - std::panicking::default_hook::h3067e8318decd17a
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:225:9
[INFO] [stderr]     10:     0x55e951715ddd - std::panicking::rust_panic_with_hook::h81b8facc50f34daa
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:591:17
[INFO] [stderr]     11:     0x55e9517159d7 - std::panicking::begin_panic_handler::{{closure}}::ha376ab85d95a000e
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:497:13
[INFO] [stderr]     12:     0x55e95171357c - std::sys_common::backtrace::__rust_end_short_backtrace::h6795c8afdd1a77e6
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:141:18
[INFO] [stderr]     13:     0x55e951715939 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:493:5
[INFO] [stderr]     14:     0x55e95122ab9b - std::panicking::begin_panic_fmt::hf43a0025042538e2
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:435:5
[INFO] [stderr]     15:     0x55e951236643 - cmake::fail::h2ddf44b1720abb19
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.45/src/lib.rs:894:5
[INFO] [stderr]     16:     0x55e951235fa2 - cmake::run::hb7c356f0ec84c091
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.45/src/lib.rs:872:9
[INFO] [stderr]     17:     0x55e95123225c - cmake::Config::build::hd786327d906d1c61
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.45/src/lib.rs:707:13
[INFO] [stderr]     18:     0x55e95122d8c1 - build_script_build::main::h1973648a7737c903
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/build.rs:30:19
[INFO] [stderr]     19:     0x55e95122c6ab - core::ops::function::FnOnce::call_once::he231622988c0c39b
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/core/src/ops/function.rs:227:5
[INFO] [stderr]     20:     0x55e95122ce9e - std::sys_common::backtrace::__rust_begin_short_backtrace::h89b184af13234469
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/sys_common/backtrace.rs:125:18
[INFO] [stderr]     21:     0x55e95122cbd1 - std::rt::lang_start::{{closure}}::h96bf6ab7d113fcef
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/rt.rs:49:18
[INFO] [stderr]     22:     0x55e9517161da - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h3b8c329143d7638a
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/core/src/ops/function.rs:259:13
[INFO] [stderr]     23:     0x55e9517161da - std::panicking::try::do_call::h4b72c261b4eefc1b
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:379:40
[INFO] [stderr]     24:     0x55e9517161da - std::panicking::try::h703d31b7896cbd49
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panicking.rs:343:19
[INFO] [stderr]     25:     0x55e9517161da - std::panic::catch_unwind::h37cad9b35388a915
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/panic.rs:431:14
[INFO] [stderr]     26:     0x55e9517161da - std::rt::lang_start_internal::hab5a8a909af4f90e
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/rt.rs:34:21
[INFO] [stderr]     27:     0x55e95122cbb0 - std::rt::lang_start::h4222bae25ec623a8
[INFO] [stderr]                                  at /rustc/881c1ac408d93bb7adaa3a51dabab9266e82eee8/library/std/src/rt.rs:48:5
[INFO] [stderr]     28:     0x55e95122dd1c - main
[INFO] [stderr]     29:     0x7fae8abaf0b3 - __libc_start_main
[INFO] [stderr]     30:     0x55e95122bfae - _start
[INFO] [stderr]     31:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "b77f82fd660527f529df3b5d1d9f27a7c6a3b8f51b8a955a22b6aa5d2c535c12", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b77f82fd660527f529df3b5d1d9f27a7c6a3b8f51b8a955a22b6aa5d2c535c12", kill_on_drop: false }`
[INFO] [stdout] b77f82fd660527f529df3b5d1d9f27a7c6a3b8f51b8a955a22b6aa5d2c535c12
